ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3a65A4 - ECOD Domain | ECOD

ECOD/Domains/e3a65A4

e3a65A4

UID: 001278583

PDB

Range: A:105-266
PDB: 3A65 chain A(all domains)
UniProt: P07061 (all domains)
Gene: nylB

Molecule: 6-aminohexanoate-dimer hydrolase

3D Structure

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Related Domains

Browse other domains in Beta-lactamase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyBeta-lactamase(4019.1.1.1)

Ligands

in contact, ≤ 4 Å

Aminocaproic acidACA
drugDrugBank DB00513
Sodium ionNA
metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer.

Pfam Families

PF00144Beta-lactamase

Beta-lactamase

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 3A65 RCSB PDB: 3A65 PDBe: 3A65 UniProt: P07061

Downloads

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Drug annotations from DrugDomain.