ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4nzgC1 - ECOD Domain | ECOD

ECOD/Domains/e4nzgC1

e4nzgC1

UID: 001282131

PDB

Range: C:12-104
PDB: 4NZG chain C(all domains)
UniProt: P03355 (all domains)
Gene: gag-pol

Molecule: Integrase p46

3D Structure

Loading viewer...

Related Domains

Browse other domains in zf-H2C2, zf-H3C2 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyzf-H2C2, zf-H3C2(101.1.1.301)

Ligands

in contact, ≤ 4 Å

1,4-DithiothreitolDTT
drugDrugBank DB04447
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09337zf-H2C2

H2C2 zinc finger

ClanCL0361C2H2-zf

PF16721zf-H3C2

Zinc-finger like, probable DNA-binding

ClanCL0361C2H2-zf

External Links

ECOD PDB View: 4NZG RCSB PDB: 4NZG PDBe: 4NZG UniProt: P03355

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure