ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4jp4A1 - ECOD Domain | ECOD

ECOD/Domains/e4jp4A1

e4jp4A1

UID: 001283020

PDB

Range: A:104-272
PDB: 4JP4 chain A(all domains)
UniProt: P45452 (all domains)
Gene: MMP13

Molecule: Collagenase 3 (EC 3.4.24.-) (Matrix metalloproteinase-13) (MMP-13)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_M10 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M10(2498.1.1.1)

Pfam Families

PF00413Peptidase_M10

Matrixin

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 4JP4 RCSB PDB: 4JP4 PDBe: 4JP4 UniProt: P45452

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure