ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mrgA1 - ECOD Domain | ECOD

ECOD/Domains/e4mrgA1

e4mrgA1

UID: 001285626

PDB

Range: A:24-173
PDB: 4MRG chain A(all domains)
UniProt: P15379 (all domains)
Gene: Cd44

Molecule: CD44 antigen

3D Structure

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Related Domains

Browse other domains in Xlink →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-type lectin-like(209)

HH-groupC-type lectin-like(209.1)

TT-groupC-type lectin-like(209.1.1)

FFamilyXlink(209.1.1.4)

Ligands

in contact, ≤ 4 Å

1,2,3,4-tetrahydroisoquinolin-5-amine24W

+ 3 additives (Dimethyl sulfoxide, Glycerin, Sulfate ion)

Dimethyl sulfoxideDMS
DrugBank DB01093
GlycerinGOL

Pfam Families

Extracellular link domain

ClanCL0056C_Lectin

External Links

ECOD PDB View: 4MRG RCSB PDB: 4MRG PDBe: 4MRG UniProt: P15379

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.