ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ka9A1 - ECOD Domain | ECOD

ECOD/Domains/e4ka9A1

e4ka9A1

UID: 001289123

PDB

Range: A:1-233
PDB: 4KA9 chain A(all domains)
UniProt: P42212 (all domains)
Gene: GFP

Molecule: Green fluorescent protein

3D Structure

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Related Domains

Browse other domains in GFP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupGFP-like(271)

HH-groupGFP-like(271.1)

TT-groupGFP-like(271.1.1)

FFamilyGFP(271.1.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Zinc ionZN
metal

+ 2 additives (HEPES, 1,2-ETHANEDIOL)

HEPESEPE

Pfam Families

Green fluorescent protein

ClanCL0069GFP

External Links

ECOD PDB View: 4KA9 RCSB PDB: 4KA9 PDBe: 4KA9 UniProt: P42212

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB16872

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.