ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ogqG1 - ECOD Domain | ECOD

ECOD/Domains/e4ogqG1

e4ogqG1

UID: 001291706

PDB

Range: G:1-37
PDB: 4OGQ chain G(all domains)
UniProt: P58246 (all domains)
Gene: petG

Molecule: Cytochrome b6-f complex subunit 5

3D Structure

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Related Domains

Browse other domains in PetG →

Classification

AArchitectureextended segments(a.20)

XX-groupPetG subunit of the cytochrome b6f complex(5106)

HH-groupPetG subunit of the cytochrome b6f complex(5106.1)

TT-groupPetG subunit of the cytochrome b6f complex(5106.1.1)

FFamilyPetG(5106.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Undecyl-Beta-D-MaltopyranosideUMQ
drugDrugBank DB02686

Pfam Families

Cytochrome B6-F complex subunit 5

External Links

ECOD PDB View: 4OGQ RCSB PDB: 4OGQ PDBe: 4OGQ UniProt: P58246

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(1S,8E)-1-{[(2S)-1-hydroxy-3-{[(1S)-1-hydroxypentadecyl]oxy}propan-2-yl]oxy}heptadec-8-en-1-ol

(1S,8E,1'R,8'Z)-1,1'-{[(2S)-3-hydroxypropane-1,2-diyl]bis(oxy)}bisoctadec-8-en-1-ol3WM

(1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate7PH

Shown in the structure viewer. Drug annotations from DrugDomain.