ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4d1kB2 - ECOD Domain | ECOD

ECOD/Domains/e4d1kB2

e4d1kB2

UID: 001294276

PDB

Range: B:1-146
PDB: 4D1K chain B(all domains)
UniProt: Q5D0H3 (all domains)
Gene: gag

Molecule: Gag protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Gag_p24 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyGag_p24(170.2.1.1)

Pfam Families

PF00607Gag_p24

gag protein p24 N-terminal domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 4D1K RCSB PDB: 4D1K PDBe: 4D1K UniProt: Q5D0H3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure