ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mu8B1 - ECOD Domain | ECOD

ECOD/Domains/e4mu8B1

e4mu8B1

UID: 001294372

PDB

Range: B:-4-103
PDB: 4MU8 chain B(all domains)
UniProt: P00044 (all domains)
Gene: CYC1

Molecule: Cytochrome c iso-1

3D Structure

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Related Domains

Browse other domains in Cytochrom_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrom_C(107.1.1.1)

Ligands

in contact, ≤ 4 Å

tert-butanolTBU
drugDrugBank DB03900
Ferroheme CHEC
drugDrugBank DB03317within 5 Å only

Pfam Families

PF00034Cytochrom_C

Cytochrome c

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 4MU8 RCSB PDB: 4MU8 PDBe: 4MU8 UniProt: P00044

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.