ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4oi0A3 - ECOD Domain | ECOD

ECOD/Domains/e4oi0A3

e4oi0A3

UID: 001296390

PDB

Range: A:4-82
PDB: 4OI0 chain A(all domains)
UniProt: P52874 (all domains)
Gene: clpf-1

Molecule: Protein clpf-1

3D Structure

Loading viewer...

Related Domains

Browse other domains in CLP1_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupProtein CLP1 jelly-roll domain(10.34)

TT-groupProtein CLP1 jelly-roll domain(10.34.1)

FFamilyCLP1_N(10.34.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
SarcosineSAR

+ 1 additive (Nonaethylene glycol)

Nonaethylene glycol2PE

Pfam Families

N-terminal beta-sandwich domain of polyadenylation factor

External Links

ECOD PDB View: 4OI0 RCSB PDB: 4OI0 PDBe: 4OI0 UniProt: P52874

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.