ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lmsD1 - ECOD Domain | ECOD

ECOD/Domains/e4lmsD1

e4lmsD1

UID: 001296902

PDB

Range: D:14-176
PDB: 4LMS chain D(all domains)
UniProt: U5T8F2 (all domains)

Molecule: cryptophyte phycocyanin (beta chain)

3D Structure

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Related Domains

Browse other domains in Phycobilisome →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyPhycobilisome(106.1.1.2)

Ligands

in contact, ≤ 4 Å

PhycocyanobilinCYC
15,16-DIHYDROBILIVERDINDBV
mesobiliverdin IX(alpha)M1V

Pfam Families

PF00502Phycobilisome

Phycobilisome protein

ClanCL0090Globin

External Links

ECOD PDB View: 4LMS RCSB PDB: 4LMS PDBe: 4LMS UniProt: U5T8F2

Downloads

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Hexaethylene glycol

Shown in the structure viewer. Drug annotations from DrugDomain.