ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pmmA1 - ECOD Domain | ECOD

ECOD/Domains/e4pmmA1

e4pmmA1

UID: 001297296

PDB

Range: A:501-791
PDB: 4PMM chain A(all domains)
UniProt: P04629 (all domains)
Gene: NTRK1

Molecule: High affinity nerve growth factor receptor

3D Structure

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Related Domains

Browse other domains in PK_Tyr_Ser-Thr →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPK_Tyr_Ser-Thr(206.1.1.20)

Ligands

in contact, ≤ 4 Å

N-(3-cyclopropyl-1-phenyl-1H-pyrazol-5-yl)-2-{4-[3-methoxy-4-(4-methyl-1H-imidazol-1-yl)phenyl]-1H-1,2,3-triazol-1-yl}acetamide31V
Chloride ionCL

+ 2 additives (Acetate, Glycerin)

AcetateACT

Pfam Families

PF07714PK_Tyr_Ser-Thr

Protein tyrosine and serine/threonine kinase

ClanCL0016PKinase

External Links

ECOD PDB View: 4PMM RCSB PDB: 4PMM PDBe: 4PMM UniProt: P04629

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.