ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4p5oB1 - ECOD Domain | ECOD

ECOD/Domains/e4p5oB1

e4p5oB1

UID: 001299834

PDB

Range: B:23-104
PDB: 4P5O chain B(all domains)
UniProt: P62877 (all domains)
Gene: RBX1

Molecule: E3 ubiquitin-protein ligase RBX1

3D Structure

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Related Domains

Browse other domains in zf-rbx1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-rbx1(376.1.1.17)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12678zf-rbx1

RING-H2 zinc finger domain

ClanCL0229RING

External Links

ECOD PDB View: 4P5O RCSB PDB: 4P5O PDBe: 4P5O UniProt: P62877

Downloads

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