ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vfxA2 - ECOD Domain | ECOD

ECOD/Domains/e1vfxA2

e1vfxA2

UID: 001306068

PDB

Range: A:4-356
PDB: 1VFX chain A(all domains)
UniProt: P33173 (all domains)
Gene: Kif1a

Molecule: PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C and A HIS TAG

3D Structure

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Related Domains

Browse other domains in Kinesin,Microtub_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyKinesin,Microtub_bd(2004.1.1.250)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Aluminum fluorideAF3
Magnesium ionMG

Pfam Families

PF00225Kinesin

Kinesin motor domain

ClanCL0023P-loop_NTPase

PF16796Microtub_bd

Microtubule binding

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1VFX RCSB PDB: 1VFX PDBe: 1VFX UniProt: P33173

Downloads

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metal

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.