ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4dhjE1 - ECOD Domain | ECOD

ECOD/Domains/e4dhjE1

e4dhjE1

UID: 001307638

PDB

Range: E:52-275
PDB: 4DHJ chain E(all domains)
UniProt: Q9XVR6 (all domains)
Gene: otub-1

Molecule: Ubiquitin thioesterase otubain-like (EC 3.4.19.12) (Deubiquitinating enzyme otubain-like) (Ubiquitin-specific-processing protease otubain-like)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_C65 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C65(219.1.1.48)

Pfam Families

PF10275Peptidase_C65

Peptidase C65 Otubain

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 4DHJ RCSB PDB: 4DHJ PDBe: 4DHJ UniProt: Q9XVR6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure