ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2epgA1 - ECOD Domain | ECOD

ECOD/Domains/e2epgA1

e2epgA1

UID: 001307802

PDB

Range: A:1-476
PDB: 2EPG chain A(all domains)
UniProt: Q5SHE5 (all domains)
Gene: rtcB

Molecule: tRNA-splicing ligase RtcB (EC 6.5.1.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RtcB →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupHypothetical protein PH1602(304.106)

TT-groupHypothetical protein PH1602(304.106.1)

FFamilyRtcB(304.106.1.1)

Pfam Families

tRNA-splicing ligase RtcB

External Links

ECOD PDB View: 2EPG RCSB PDB: 2EPG PDBe: 2EPG UniProt: Q5SHE5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure