ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1mw8X2 - ECOD Domain | ECOD

ECOD/Domains/e1mw8X2

e1mw8X2

UID: 001308570

PDB

Range: X:157-214,X:461-592
PDB: 1MW8 chain X(all domains)
UniProt: P06612 (all domains)
Gene: topA

Molecule: DNA Topoisomerase I

3D Structure

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Related Domains

Browse other domains in Topoisom_bac →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyTopoisom_bac(101.1.2.19)

Ligands

in contact, ≤ 4 Å

Thymidine monophosphateTMP
drugDrugBank DB01643

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF01131Topoisom_bac

DNA topoisomerase

External Links

ECOD PDB View: 1MW8 RCSB PDB: 1MW8 PDBe: 1MW8 UniProt: P06612

Downloads

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Drug annotations from DrugDomain.