ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1y8tB1 - ECOD Domain | ECOD

ECOD/Domains/e1y8tB1

e1y8tB1

UID: 001309280

PDB

Range: B:6-202
PDB: 1Y8T chain B(all domains)
UniProt: O53896 (all domains)
Gene: pepD

Molecule: Serine protease PepD (EC 3.4.21.107) (HtrA-like serine protease)

3D Structure

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Related Domains

Browse other domains in Trypsin_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyTrypsin_2(1.1.5.33)

Pfam Families

PF13365Trypsin_2

Trypsin-like peptidase domain

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 1Y8T RCSB PDB: 1Y8T PDBe: 1Y8T UniProt: O53896

Downloads

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