ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ya0B1 - ECOD Domain | ECOD

ECOD/Domains/e1ya0B1

e1ya0B1

UID: 001309286

PDB

Range: B:1-111,B:143-497
PDB: 1YA0 chain B(all domains)
UniProt: Q92540 (all domains)
Gene: SMG7

Molecule: Nonsense-mediated mRNA decay factor SMG7 (SMG-7 homolog) (hSMG-7)

3D Structure

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Related Domains

Browse other domains in EST1_DNA_bind,EST1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyEST1_DNA_bind,EST1(109.4.1.148)

Pfam Families

PF10373EST1_DNA_bind

Est1 DNA/RNA binding domain

ClanCL0020TPR

Telomerase activating protein Est1

ClanCL0020TPR

External Links

ECOD PDB View: 1YA0 RCSB PDB: 1YA0 PDBe: 1YA0 UniProt: Q92540

Downloads

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