ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zefB2 - ECOD Domain | ECOD

ECOD/Domains/e3zefB2

e3zefB2

UID: 001309340

PDB

Range: B:1256-1575
PDB: 3ZEF chain B(all domains)
UniProt: P33334 (all domains)
Gene: PRP8

Molecule: Pre-mRNA-splicing factor 8

3D Structure

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Related Domains

Browse other domains in U6-snRNA_bdg,U5_2-snRNA_bdg →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyU6-snRNA_bdg,U5_2-snRNA_bdg(4967.1.1.12)

Pfam Families

PF10596U6-snRNA_bdg

U6-snRNA interacting domain of PrP8

ClanCL0363H-int

PF10597U5_2-snRNA_bdg

U5-snRNA binding site 2 of PrP8

External Links

ECOD PDB View: 3ZEF RCSB PDB: 3ZEF PDBe: 3ZEF UniProt: P33334

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