ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3j1aC1 - ECOD Domain | ECOD

ECOD/Domains/e3j1aC1

e3j1aC1

UID: 001311102

PDB

Range: C:184-225,C:255-287,C:307-380
PDB: 3J1A chain C(all domains)
UniProt: P49861 (all domains)
Gene: 5

Molecule: Major capsid protein (Gene product 5) (gp5) (Major head protein) [Cleaved into: Scaffolding domain delta]

3D Structure

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Related Domains

Browse other domains in Phage_capsid →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupMajor capsid protein gp5(2485.3)

TT-groupMajor capsid protein gp5(2485.3.1)

FFamilyPhage_capsid(2485.3.1.3)

Pfam Families

PF05065Phage_capsid

Phage capsid family

ClanCL0373Phage-coat

External Links

ECOD PDB View: 3J1A RCSB PDB: 3J1A PDBe: 3J1A UniProt: P49861

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