ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4j25F1 - ECOD Domain | ECOD

ECOD/Domains/e4j25F1

e4j25F1

UID: 001311108

PDB

Range: F:8-201
PDB: 4J25 chain F(all domains)
UniProt: Q88CM1 (all domains)
Gene: PP_5159

Molecule: Putative uncharacterized protein

3D Structure

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Related Domains

Browse other domains in 2OG-FeII_Oxy_3 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamily2OG-FeII_Oxy_3(10.12.1.53)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal
N-oxalylglycineOGA

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF136402OG-FeII_Oxy_3

2OG-Fe(II) oxygenase superfamily

ClanCL0029Cupin

External Links

ECOD PDB View: 4J25 RCSB PDB: 4J25 PDBe: 4J25 UniProt: Q88CM1

Downloads

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