ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4q5sC6 - ECOD Domain | ECOD

ECOD/Domains/e4q5sC6

e4q5sC6

UID: 001312081

PDB

Range: C:992-1118
PDB: 4Q5S chain C(all domains)
UniProt: Q8RQE9 (all domains)
Gene: rpoB

Molecule: DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-terminal domain in beta subunit of DNA dependent RNA-polymerase(4043)

HH-groupC-terminal domain in beta subunit of DNA dependent RNA-polymerase(4043.1)

TT-groupC-terminal domain in beta subunit of DNA dependent RNA-polymerase(4043.1.1)

FFamilyRNA_pol_Rpb2_6,RNA_pol_Rpb2_7(4043.1.1.1)

Pfam Families

PF00562RNA_pol_Rpb2_6

RNA polymerase Rpb2, domain 6

ClanCL0410LEF-8-like

PF04560RNA_pol_Rpb2_7

RNA polymerase Rpb2, domain 7

External Links

ECOD PDB View: 4Q5S RCSB PDB: 4Q5S PDBe: 4Q5S UniProt: Q8RQE9

Downloads

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