ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4n4rA1 - ECOD Domain | ECOD

ECOD/Domains/e4n4rA1

e4n4rA1

UID: 001313003

RepresentativePDB

Range: A:226-786
PDB: 4N4R chain A(all domains)
UniProt: Q8ZRW0 (all domains)
Gene: lptD

Molecule: LPS-assembly protein LptD

3D Structure

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Related Domains

Browse other domains in LptD →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupLPS-assembly protein LptD(5084.10)

TT-groupLPS-assembly protein LptD(5084.10.1)

FFamilyLptD(5084.10.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Cacodylate ion)

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

LPS transport system D

ClanCL0193MBB

External Links

ECOD PDB View: 4N4R RCSB PDB: 4N4R PDBe: 4N4R UniProt: Q8ZRW0

Downloads

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