ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ozcA1 - ECOD Domain | ECOD

ECOD/Domains/e4ozcA1

e4ozcA1

UID: 001314122

PDB

Range: A:1-57
PDB: 4OZC chain A(all domains)
UniProt: P19909 (all domains)
Gene: spg

Molecule: Streptococcal Protein GB1 Backbone Modified Variant: beta-ACPC21, beta-ACPC24, beta-3-Lys28, beta-3-Lys31, beta-ACPC35, beta-ACPC40

3D Structure

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Related Domains

Browse other domains in IgG_binding_B →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupImmunoglobulin-binding domains(221.3)

TT-groupImmunoglobulin-binding domains(221.3.1)

FFamilyIgG_binding_B(221.3.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01378IgG_binding_B

B domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 4OZC RCSB PDB: 4OZC PDBe: 4OZC UniProt: P19909

Downloads

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