ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lvcC1 - ECOD Domain | ECOD

ECOD/Domains/e4lvcC1

e4lvcC1

UID: 001316778

PDB

Range: C:231-391
PDB: 4LVC chain C(all domains)
UniProt: A0A087WNH6 (all domains)
Gene: ahcY

Molecule: S-adenosyl-L-homocysteine hydrolase (SAHase)

3D Structure

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Related Domains

Browse other domains in AdoHcyase_NAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyAdoHcyase_NAD(2003.1.1.9)

Ligands

in contact, ≤ 4 Å

AdenosineADN
drugDrugBank DB00640
NadideNAD
drugDrugBank DB14128

+ 3 additives (Acetate, Glycerin, Ammonium ion)

Pfam Families

PF00670AdoHcyase_NAD

S-adenosyl-L-homocysteine hydrolase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4LVC RCSB PDB: 4LVC PDBe: 4LVC UniProt: A0A087WNH6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT
DrugBank DB14511
GlycerinGOL
DrugBank DB09462
Ammonium ionNH4

Shown in the structure viewer. Drug annotations from DrugDomain.