ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4um2A1 - ECOD Domain | ECOD

ECOD/Domains/e4um2A1

e4um2A1

UID: 001318606

PDB

Range: A:-581-822,A:879-1159
PDB: 4UM2 chain A(all domains)
UniProt: Q86US8 (all domains)
Gene: SMG6

Molecule: Telomerase-binding protein EST1A (EC 3.1.-.-) (Ever shorter telomeres 1A) (hEST1A) (Nonsense mediated mRNA decay factor SMG6) (Smg-6 homolog) (hSmg5/7a)

3D Structure

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Related Domains

Browse other domains in EST1_DNA_bind,EST1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyEST1_DNA_bind,EST1(109.4.1.148)

Pfam Families

PF10373EST1_DNA_bind

Est1 DNA/RNA binding domain

ClanCL0020TPR

Telomerase activating protein Est1

ClanCL0020TPR

External Links

ECOD PDB View: 4UM2 RCSB PDB: 4UM2 PDBe: 4UM2 UniProt: Q86US8

Downloads

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