ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4oo1J1 - ECOD Domain | ECOD

ECOD/Domains/e4oo1J1

e4oo1J1

UID: 001318704

RepresentativePDB

Range: J:128-420
PDB: 4OO1 chain J(all domains)
UniProt: Q12149 (all domains)
Gene: RRP6

Molecule: Exosome complex exonuclease RRP6 (Rrp6p) (EC 3.1.13.-) (Ribosomal RNA-processing protein 6)

3D Structure

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Related Domains

Browse other domains in DNA_pol_A_exo1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDNA_pol_A_exo1(2484.1.1.20)

Pfam Families

PF01612DNA_pol_A_exo1

3'-5' exonuclease

ClanCL0219RNase_H

External Links

ECOD PDB View: 4OO1 RCSB PDB: 4OO1 PDBe: 4OO1 UniProt: Q12149

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