ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4kagA1 - ECOD Domain | ECOD

ECOD/Domains/e4kagA1

e4kagA1

UID: 001319787

PDB

Range: A:3-230
PDB: 4KAG chain A(all domains)
UniProt: P42212 (all domains)
Gene: GFP

Molecule: Green fluorescent protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in GFP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupGFP-like(271)

HH-groupGFP-like(271.1)

TT-groupGFP-like(271.1.1)

FFamilyGFP(271.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Sulfate ion, Tromethamine, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
TromethamineTRS
DrugBank DB03754
1,2-ETHANEDIOL

Pfam Families

Green fluorescent protein

ClanCL0069GFP

External Links

ECOD PDB View: 4KAG RCSB PDB: 4KAG PDBe: 4KAG UniProt: P42212

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.