ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4orrA1 - ECOD Domain | ECOD

ECOD/Domains/e4orrA1

e4orrA1

UID: 001320027

PDB

Range: A:28-188
PDB: 4ORR chain A(all domains)
UniProt: P41222 (all domains)
Gene: PTGDS

Molecule: Prostaglandin-H2 D-isomerase

3D Structure

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Related Domains

Browse other domains in Lipocalin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyLipocalin(9.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL)

Sulfate ionSO4
DrugBank DB14546
3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOLPE3

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00061Lipocalin

Lipocalin / cytosolic fatty-acid binding protein family

ClanCL0116Calycin

External Links

ECOD PDB View: 4ORR RCSB PDB: 4ORR PDBe: 4ORR UniProt: P41222

Downloads

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