ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ozeB2 - ECOD Domain | ECOD

ECOD/Domains/e4ozeB2

e4ozeB2

UID: 001322912

PDB

Range: B:2-121
PDB: 4OZE chain B(all domains)
UniProt: O67648 (all domains)
Gene: lpxC

Molecule: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase

3D Structure

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Related Domains

Browse other domains in LpxC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyLpxC(212.1.1.15)

Ligands

in contact, ≤ 4 Å

uridine-5'-diphosphate-3-O-(R-3-hydroxymyristoyl)-glucosamine24G
Chloride ionCL
Zinc ionZN

Pfam Families

UDP-3-O-acyl N-acetylglycosamine deacetylase

ClanCL0329S5

External Links

ECOD PDB View: 4OZE RCSB PDB: 4OZE PDBe: 4OZE UniProt: O67648

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.