ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pv1F1 - ECOD Domain | ECOD

ECOD/Domains/e4pv1F1

e4pv1F1

UID: 001323683

PDB

Range: F:2-32
PDB: 4PV1 chain F(all domains)
UniProt: P83796 (all domains)
Gene: petM

Molecule: Cytochrome b6-f complex subunit 7

3D Structure

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Related Domains

Browse other domains in PetM →

Classification

AArchitectureextended segments(a.20)

XX-groupPetM subunit of the cytochrome b6f complex(5015)

HH-groupPetM subunit of the cytochrome b6f complex(5015.1)

TT-groupPetM subunit of the cytochrome b6f complex(5015.1.1)

FFamilyPetM(5015.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
(7R,17E)-4-HYDROXY-N,N,N,7-TETRAMETHYL-7-[(8E)-OCTADEC-8-ENOYLOXY]-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOS-17-EN-1-AMINIUM 4-OXIDEOPC
Cadmium ion

Pfam Families

PetM family of cytochrome b6f complex subunit 7

External Links

ECOD PDB View: 4PV1 RCSB PDB: 4PV1 PDBe: 4PV1 UniProt: P83796

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.