ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xjkB2 - ECOD Domain | ECOD

ECOD/Domains/e1xjkB2

e1xjkB2

UID: 001338094

PDB

Range: B:1-132
PDB: 1XJK chain B(all domains)
UniProt: O33839 (all domains)
Gene: nrdJ

Molecule: ribonucleotide reductase, B12-dependent

3D Structure

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Related Domains

Browse other domains in Ribonuc_red_lgN →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupATP cone(103.2)

TT-groupATP cone(103.2.1)

FFamilyRibonuc_red_lgN(103.2.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
2'-Deoxyguanosine-5'-TriphosphateDGT
drugDrugBank DB02181within 5 Å only

Pfam Families

PF00317Ribonuc_red_lgN

Ribonucleotide reductase, all-alpha domain

External Links

ECOD PDB View: 1XJK RCSB PDB: 1XJK PDBe: 1XJK UniProt: O33839

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.