ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3g5oA1 - ECOD Domain | ECOD

ECOD/Domains/e3g5oA1

e3g5oA1

UID: 000134503

PDB

Range: A:8-98
PDB: 3G5O chain A(all domains)
UniProt: O33347 (all domains)
Gene: relF

Molecule: Uncharacterized protein Rv2865

3D Structure

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Related Domains

Browse other domains in PhdYeFM_antitox →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupYefM-like(4267)

HH-groupYefM-like(4267.1)

TT-groupYefM-like(4267.1.1)

FFamilyPhdYeFM_antitox(4267.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Thiocyanate ionSCN

+ 2 additives (Glycerin, Imidazole)

GlycerinGOL

Pfam Families

PF02604PhdYeFM_antitox

Antitoxin Phd_YefM, type II toxin-antitoxin system

ClanCL0871YefM-like

External Links

ECOD PDB View: 3G5O RCSB PDB: 3G5O PDBe: 3G5O UniProt: O33347

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

ImidazoleIMD

DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.