ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mjkB1 - ECOD Domain | ECOD

ECOD/Domains/e4mjkB1

e4mjkB1

UID: 001348630

RepresentativePDB

Range: B:1-265
PDB: 4MJK chain B(all domains)
UniProt: O28407 (all domains)
Gene: AF_1872

Molecule: Type I-A CRISPR-associated protein Cas5

3D Structure

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Related Domains

Browse other domains in Cas_Cas5d →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR system Cas5 homologs(304.158)

TT-groupCRISPR system Cas5 homologs(304.158.1)

FFamilyCas_Cas5d(304.158.1.2)

Pfam Families

PF09704Cas_Cas5d

CRISPR-associated protein (Cas_Cas5)

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 4MJK RCSB PDB: 4MJK PDBe: 4MJK UniProt: O28407

Downloads

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