ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pfyB2 - ECOD Domain | ECOD

ECOD/Domains/e4pfyB2

e4pfyB2

UID: 001349636

PDB

Range: B:60-161
PDB: 4PFY chain B(all domains)
UniProt: Q9X0V0 (all domains)
Gene: TM_1223

Molecule: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOligo-peptide binding protein (OPPA) insertion domain(304.136)

TT-groupOligo-peptide binding protein (OPPA) insertion domain(304.136.1)

FFamilySBP_bac_5(304.136.1.1)

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

ECOD PDB View: 4PFY RCSB PDB: 4PFY PDBe: 4PFY UniProt: Q9X0V0

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