ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vrbA1 - ECOD Domain | ECOD

ECOD/Domains/e1vrbA1

e1vrbA1

UID: 000001362

RepresentativePDB

Range: A:8-326
PDB: 1VRB chain A(all domains)
UniProt: P46327 (all domains)
Gene: yxbC

Molecule: Putative asparaginyl hydroxylase

3D Structure

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Related Domains

Browse other domains in JmjC_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC_2(10.12.1.40)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

JmjC domain

ClanCL0029Cupin

External Links

ECOD PDB View: 1VRB RCSB PDB: 1VRB PDBe: 1VRB UniProt: P46327

Downloads

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