ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3kydD1 - ECOD Domain | ECOD

ECOD/Domains/e3kydD1

e3kydD1

UID: 000138098

PDB

Range: D:20-96
PDB: 3KYD chain D(all domains)
UniProt: P63165 (all domains)
Gene: SUMO1

Molecule: Small ubiquitin-related modifier 1

3D Structure

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Related Domains

Browse other domains in Rad60-SLD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyRad60-SLD(221.1.1.44)

Ligands

in contact, ≤ 4 Å

5'-{[(3-aminopropyl)sulfonyl]amino}-5'-deoxyadenosineVMX

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11976Rad60-SLD

Ubiquitin-2 like Rad60 SUMO-like

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 3KYD RCSB PDB: 3KYD PDBe: 3KYD UniProt: P63165

Downloads

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