ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2h88N2 - ECOD Domain | ECOD

ECOD/Domains/e2h88N2

e2h88N2

UID: 001392295

PDB

Range: N:247-375
PDB: 2H88 chain N(all domains)
UniProt: Q9YHT1 (all domains)
Gene: SDHA

Molecule: SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT

3D Structure

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Related Domains

Browse other domains in FAD_binding_2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupSuccinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain(278)

HH-groupSuccinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain(278.1)

TT-groupSuccinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain(278.1.1)

FFamilyFAD_binding_2(278.1.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Malate Like IntermediateTEO
drugDrugBank DB03343

Pfam Families

PF00890FAD_binding_2

FAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2H88 RCSB PDB: 2H88 PDBe: 2H88 UniProt: Q9YHT1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Azide ion

Potassium ionK

metal

Unknown ligandUNL

Shown in the structure viewer. Drug annotations from DrugDomain.