ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3se0A2 - ECOD Domain | ECOD

ECOD/Domains/e3se0A2

e3se0A2

UID: 001395337

PDB

Range: A:447-587
PDB: 3SE0 chain A(all domains)
UniProt: O57728 (all domains)
Gene: atpA

Molecule: V-type ATP synthase alpha chain

3D Structure

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Related Domains

Browse other domains in ATP-synt_VA_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupC-terminal domain of alpha and beta subunits of F1 ATP synthase(160)

HH-groupC-terminal domain of alpha and beta subunits of F1 ATP synthase(160.1)

TT-groupC-terminal domain of alpha and beta subunits of F1 ATP synthase(160.1.1)

FFamilyATP-synt_VA_C(160.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, Tromethamine)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
TromethamineTRS
DrugBank DB03754

Shown in the structure viewer.

Pfam Families

PF22919ATP-synt_VA_C

C-terminal domain of V and A type ATP synthase

External Links

ECOD PDB View: 3SE0 RCSB PDB: 3SE0 PDBe: 3SE0 UniProt: O57728

Downloads

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Drug annotations from DrugDomain.