ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vbbF1 - ECOD Domain | ECOD

ECOD/Domains/e3vbbF1

e3vbbF1

UID: 001396039

PDB

Range: F:141-476
PDB: 3VBB chain F(all domains)
UniProt: P49591 (all domains)
Gene: SARS1

Molecule: Seryl-tRNA synthetase, cytoplasmic

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2b →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2b(314.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00587tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 3VBB RCSB PDB: 3VBB PDBe: 3VBB UniProt: P49591

Downloads

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