ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1vqqB1 - ECOD Domain | ECOD

ECOD/Domains/e1vqqB1

e1vqqB1

UID: 001396121

PDB

Range: B:400-525
PDB: 1VQQ chain B(all domains)
UniProt: Q2PF50 (all domains)
Gene: mecA

Molecule: Penicillin binding protein 2'

3D Structure

Loading viewer...

Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyTranspeptidase(4019.1.1.3)

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 1VQQ RCSB PDB: 1VQQ PDBe: 1VQQ UniProt: Q2PF50

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure