ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vqqB2 - ECOD Domain | ECOD

ECOD/Domains/e1vqqB2

e1vqqB2

UID: 001396122

PDB

Range: B:328-399,B:526-668
PDB: 1VQQ chain B(all domains)
UniProt: Q2PF50 (all domains)
Gene: mecA

Molecule: Penicillin binding protein 2'

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyTranspeptidase(223.3.1.3)

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 1VQQ RCSB PDB: 1VQQ PDBe: 1VQQ UniProt: Q2PF50

Downloads

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