ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mmzA5 - ECOD Domain | ECOD

ECOD/Domains/e4mmzA5

e4mmzA5

UID: 001397137

PDB

Range: A:439-598
PDB: 4MMZ chain A(all domains)
UniProt: P06756 (all domains)
Gene: ITGAV

Molecule: Integrin alpha-V

3D Structure

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Related Domains

Browse other domains in Integrin_A_Ig_1 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyIntegrin_A_Ig_1(11.1.1.112)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
MANGANESE (II) IONMN
metal
Sodium ion

Pfam Families

PF08441Integrin_A_Ig_1

Integrin alpha Ig-like domain 1

ClanCL0159E-set

External Links

ECOD PDB View: 4MMZ RCSB PDB: 4MMZ PDBe: 4MMZ UniProt: P06756

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.