ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4twcB1 - ECOD Domain | ECOD

ECOD/Domains/e4twcB1

e4twcB1

UID: 001398037

PDB

Range: B:1-295
PDB: 4TWC chain B(all domains)
UniProt: P48730 (all domains)
Gene: CSNK1D

Molecule: Casein kinase I isoform delta

3D Structure

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Related Domains

Browse other domains in Pkinase, Pkinase_fungal →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase, Pkinase_fungal(206.1.1.72)

Ligands

in contact, ≤ 4 Å

2-{[2-(trifluoromethoxy)benzoyl]amino}-N-[6-(trifluoromethyl)-1H-benzimidazol-2-yl]-1,3-thiazole-4-carboxamide37J

+ 4 additives (Dimethyl sulfoxide, Glycerin, Sulfate ion, …)

Dimethyl sulfoxideDMS
DrugBank DB01093
Glycerin

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

PF17667Pkinase_fungal

Fungal protein kinase

ClanCL0016PKinase

External Links

ECOD PDB View: 4TWC RCSB PDB: 4TWC PDBe: 4TWC UniProt: P48730

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

octyl beta-D-glucopyranosideBOG

Shown in the structure viewer. Drug annotations from DrugDomain.