ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4w8zA1 - ECOD Domain | ECOD

ECOD/Domains/e4w8zA1

e4w8zA1

UID: 001401497

PDB

Range: A:1-209
PDB: 4W8Z chain A(all domains)
UniProt: Q8U1S5 (all domains)
Gene: cmr1-1

Molecule: CRISPR system Cmr subunit Cmr1-1 (CRISPR type III-B/RAMP module RAMP protein Cmr1-1)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyRAMPs(304.51.1.2)

Pfam Families

RAMP superfamily

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 4W8Z RCSB PDB: 4W8Z PDBe: 4W8Z UniProt: Q8U1S5

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