ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2l08A1 - ECOD Domain | ECOD

ECOD/Domains/e2l08A1

e2l08A1

UID: 000140205

PDB

Range: A:12-97
PDB: 2L08 chain A(all domains)
UniProt: Q9H1J1 (all domains)
Gene: UPF3A

Molecule: Regulator of nonsense transcripts 3A (Nonsense mRNA reducing factor 3A) (Up-frameshift suppressor 3 homolog A) (hUpf3)

3D Structure

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Related Domains

Browse other domains in Smg4_UPF3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilySmg4_UPF3(304.9.1.6)

Pfam Families

PF03467Smg4_UPF3

Smg-4/UPF3 family

ClanCL0221RRM

External Links

ECOD PDB View: 2L08 RCSB PDB: 2L08 PDBe: 2L08 UniProt: Q9H1J1

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