ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4po5C1 - ECOD Domain | ECOD

ECOD/Domains/e4po5C1

e4po5C1

UID: 001405350

PDB

Range: C:2-161
PDB: 4PO5 chain C(all domains)
UniProt: P72870 (all domains)
Gene: apcD

Molecule: Allophycocyanin subunit alpha-B

3D Structure

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Related Domains

Browse other domains in Phycobilisome →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyPhycobilisome(106.1.1.2)

Ligands

in contact, ≤ 4 Å

PhycocyanobilinCYC

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00502Phycobilisome

Phycobilisome protein

ClanCL0090Globin

External Links

ECOD PDB View: 4PO5 RCSB PDB: 4PO5 PDBe: 4PO5 UniProt: P72870

Downloads

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