ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4o5qA3 - ECOD Domain | ECOD

ECOD/Domains/e4o5qA3

e4o5qA3

UID: 001406036

PDB

Range: A:202-325,A:452-521
PDB: 4O5Q chain A(all domains)
UniProt: P35340 (all domains)
Gene: ahpF

Molecule: Alkyl hydroperoxide reductase subunit F

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2(2003.1.2.24)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 4 additives (Glycerin, Triethylene glycol, Sulfate ion, …)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4O5Q RCSB PDB: 4O5Q PDBe: 4O5Q UniProt: P35340

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Triethylene glycolPGE

DrugBank DB02327

Sulfate ionSO4

DrugBank DB14546

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.