ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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e4w8vB1 - ECOD Domain | ECOD

ECOD/Domains/e4w8vB1

e4w8vB1

UID: 001409308

PDB

Range: B:102-339
PDB: 4W8V chain B(all domains)
UniProt: Q8U1T1 (all domains)
Gene: cmr6

Molecule: CRISPR system Cmr subunit Cmr6 (CRISPR type III-B/RAMP module RAMP protein Cmr6)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyRAMPs(304.51.1.2)

Pfam Families

RAMP superfamily

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 4W8V RCSB PDB: 4W8V PDBe: 4W8V UniProt: Q8U1T1

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