ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ni8D1 - ECOD Domain | ECOD

ECOD/Domains/e4ni8D1

e4ni8D1

UID: 001412023

PDB

Range: D:0-334
PDB: 4NI8 chain D(all domains)
UniProt: Q8RJ47 (all domains)
Gene: ligW

Molecule: 5-carboxyvanillate decarboxylase

3D Structure

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Related Domains

Browse other domains in Amidohydro_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAmidohydro_2(2002.1.1.134)

Ligands

in contact, ≤ 4 Å

5-methoxybenzene-1,3-dicarboxylic acid1WB
MANGANESE (II) IONMN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF04909Amidohydro_2

Amidohydrolase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4NI8 RCSB PDB: 4NI8 PDBe: 4NI8 UniProt: Q8RJ47

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.